PlanCare 元件库
72 条记录PlantCARE，61 个元件名。PlantCARE 官方站已下线，本库为按元件命名、共识序列与功能描述整理的子集。
| 元件名 | 共识序列 | 长度 | 类别 | 子类 | 物种 | 功能 |
|---|---|---|---|---|---|---|
| TATA-box | TATAAA | 6 | Core | Core promoter | Arabidopsis thaliana | core promoter element around -30 of transcription start |
| TATA-box | TATATA | 6 | Core | Core promoter | Arabidopsis thaliana | core promoter element around -30 of transcription start |
| TATA-box | ATATAA | 6 | Core | Core promoter | Brassica oleracea | core promoter element around -30 of transcription start |
| TATA-box | TATA | 4 | Core | Core promoter | Arabidopsis thaliana | core promoter element around -30 of transcription start |
| CAAT-box | CAAT | 4 | Common | Common | Nicotiana glutinosa | common cis-acting element in promoter and enhancer regions |
| CAAT-box | CCAAT | 5 | Common | Common | Arabidopsis thaliana | common cis-acting element in promoter and enhancer regions |
| CAAT-box | CAAAT | 5 | Common | Common | Pisum sativum | common cis-acting element in promoter and enhancer regions |
| A-box | CCGTCC | 6 | Common | Common | Petroselinum crispum | cis-acting regulatory element |
| CCGTCC motif | CCGTCC | 6 | Common | Common | Nicotiana tabacum | cis-acting regulatory element |
| 5'UTR Py-rich stretch | TTTCTTCTCT | 10 | Common | Common | Lycopersicon esculentum | cis-acting element conferring high transcription levels |
| GC-motif | CCCCCG | 6 | Stress | Anoxic | Zea mays | enhancer-like element involved in anoxic specific inducibility |
| ARE | AAACCA | 6 | Stress | Anoxic | Zea mays | cis-acting regulatory element essential for the anaerobic induction |
| 3-AF1 binding site | AAGAGATATTT | 11 | Light | Light | Solanum tuberosum | light responsive element |
| AE-box | AGAAACAA | 8 | Light | Light | Arabidopsis thaliana | part of a module for light response |
| AT1-motif | AATTATTTTTTATT | 14 | Light | Light | Arabidopsis thaliana | part of a light responsive module |
| ATCT-motif | AATCTAATCC | 10 | Light | Light | Arabidopsis thaliana | part of a conserved DNA module involved in light responsiveness |
| Box 4 | ATTAAT | 6 | Light | Light | Petroselinum crispum | part of a conserved DNA module involved in light responsiveness |
| Box I | TTTCAAA | 7 | Light | Light | Pisum sativum | light responsive element |
| Box II | CCACGTGG | 8 | Light | Light | Pisum sativum | part of a light responsive element |
| G-Box | CACGTG | 6 | Light | Light | Arabidopsis thaliana | cis-acting regulatory element involved in light responsiveness |
| G-box | CACGTT | 6 | Light | Light | Zea mays | cis-acting regulatory element involved in light responsiveness |
| G-box | CACGAC | 6 | Light | Light | Zea mays | cis-acting regulatory element involved in light responsiveness |
| G-box | CACGTC | 6 | Light | Light | Zea mays | cis-acting regulatory element involved in light responsiveness |
| GATA-motif | AAGATAAGATT | 11 | Light | Light | Arabidopsis thaliana | part of a light responsive element |
| GT1-motif | GGTTAAAT | 8 | Light | Light | Arabidopsis thaliana | light responsive element |
| Gap-box | CAAATGAA(A/G)A | 10 | Light | Light | Arabidopsis thaliana | part of a light responsive element |
| I-box | cCATATCCAAT | 11 | Light | Light | Flaveria trinervia | part of a light responsive element |
| LAMP-element | CTTTATCA | 8 | Light | Light | Arabidopsis thaliana | part of a light responsive element |
| MNF1 | GTGCCC(A/T)(A/T) | 8 | Light | Light | Zea mays | light responsive element |
| MRE | AACCTAA | 7 | Light | Light | Petroselinum crispum | MYB binding site involved in light responsiveness |
| Sp1 | GGGCGG | 6 | Light | Light | Oryza sativa | light responsive element |
| TCCC-motif | TCTCCCT | 7 | Light | Light | Spinacia oleracea | part of a light responsive element |
| TCT-motif | TCTTAC | 6 | Light | Light | Arabidopsis thaliana | part of a light responsive element |
| chs-CMA1a | TTACTTAA | 8 | Light | Light | Arabidopsis thaliana | part of a light responsive element |
| AAGAA-motif | gGTAAAGAAA | 10 | Unclassified | Unclassified | Avena sativa | |
| ABRE | ACGTG | 5 | Hormone | ABA | Arabidopsis thaliana | cis-acting element involved in the abscisic acid responsiveness |
| ABRE | GCCGCGTGGC | 10 | Hormone | ABA | Oryza sativa | cis-acting element involved in the abscisic acid responsiveness |
| AuxRR-core | GGTCCAT | 7 | Hormone | Auxin | Nicotiana tabacum | cis-acting regulatory element involved in auxin responsiveness |
| TGA-element | AACGAC | 6 | Hormone | Auxin | Brassica oleracea | auxin-responsive element |
| TGA-box | TGACGTAA | 8 | Hormone | Auxin | Glycine max | part of an auxin-responsive element |
| P-box | CCTTTTG | 7 | Hormone | Gibberellin | Oryza sativa | gibberellin-responsive element |
| GARE-motif | TCTGTTG | 7 | Hormone | Gibberellin | Brassica oleracea | gibberellin-responsive element |
| TATC-box | TATCCCA | 7 | Hormone | Gibberellin | Oryza sativa | cis-acting element involved in gibberellin-responsiveness |
| CGTCA-motif | CGTCA | 5 | Hormone | MeJA | Hordeum vulgare | cis-acting regulatory element involved in the MeJA-responsiveness |
| TGACG-motif | TGACG | 5 | Hormone | MeJA | Hordeum vulgare | cis-acting regulatory element involved in the MeJA-responsiveness |
| as-1 | TGACG | 5 | Unclassified | Unclassified | Arabidopsis thaliana | |
| TCA-element | CCATCTTTTT | 10 | Hormone | Salicylic acid | Nicotiana tabacum | cis-acting element involved in salicylic acid responsiveness |
| TCA-element | TCAGAAGAGG | 10 | Hormone | Salicylic acid | Arabidopsis thaliana | cis-acting element involved in salicylic acid responsiveness |
| ERE | ATTTCAAA | 8 | Hormone | Ethylene | Dianthus caryophyllus | ethylene-responsive element |
| DRE core | GCCGAC | 6 | Stress | Mixed stress | Arabidopsis thaliana | cis-acting element involved in dehydration, low-temp, salt stresses |
| DRE1 | ACCGAGA | 7 | Stress | Mixed stress | Zea mays | cis-acting element involved in dehydration, low-temp, salt stresses |
| HSE | AAAAAATTTC | 10 | Stress | Heat | Arabidopsis thaliana | cis-acting element involved in heat stress responsiveness |
| LTR | CCGAAA | 6 | Stress | Low temperature | Hordeum vulgare | cis-acting element involved in low-temperature responsiveness |
| MBS | CAACTG | 6 | Stress | Drought | Arabidopsis thaliana | MYB binding site involved in drought-inducibility |
| MYB | TAACTG | 6 | TF | MYB | Arabidopsis thaliana | |
| MYC | CATGTG | 6 | Stress | Drought | Arabidopsis thaliana | drought responsiveness |
| MYC | CATTTG | 6 | Stress | Drought | Arabidopsis thaliana | drought responsiveness |
| STRE | AGGGG | 5 | Stress | Stress | Arabidopsis thaliana | |
| TC-rich repeats | ATTTTCTTCA | 10 | Stress | Defense | Nicotiana tabacum | cis-acting element involved in defense and stress responsiveness |
| TC-rich repeats | GTTTTCTTAC | 10 | Stress | Defense | Nicotiana tabacum | cis-acting element involved in defense and stress responsiveness |
| WUN-motif | AAATTACT | 8 | Stress | Wound | Brassica oleracea | wound-responsive element |
| W-box | TTGACC | 6 | Stress | Defense | Arabidopsis thaliana | |
| Box-W1 | TTGACC | 6 | Stress | Defense | Petroselinum crispum | fungal elicitor responsive element |
| CAT-box | GCCACT | 6 | Development | Meristem | Arabidopsis thaliana | cis-acting regulatory element related to meristem expression |
| CCGTCC-box | CCGTCC | 6 | Development | Meristem | Petroselinum hortense | cis-acting regulatory element related to meristem specific activation |
| GCN4_motif | TGAGTCA | 7 | Development | Endosperm | Oryza sativa | cis-regulatory element involved in endosperm expression |
| O2-site | GATGACATGG | 10 | Development | Endosperm | Zea mays | cis-acting regulatory element involved in zein metabolism regulation |
| Skn-1_motif | GTCAT | 5 | Development | Endosperm | Oryza sativa | cis-acting regulatory element required for endosperm expression |
| RY-element | CATGCATG | 8 | Development | Seed | Glycine max | cis-acting regulatory element involved in seed-specific regulation |
| HD-Zip 1 | CAAT(A/T)ATTG | 9 | Development | Differentiation | Zea mays | element involved in differentiation of the palisade mesophyll cells |
| circadian | CAAAGATATC | 10 | Circadian | Circadian | Lycopersicon esculentum | cis-acting regulatory element involved in circadian control |
| CCAAT-box | CAACGG | 6 | TF | MYBHv1 | Hordeum vulgare | MYBHv1 binding site |
没有匹配的元件